YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|68518304, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFKMTLD IGSFLYKSFW YQSLRLKSMA KTLGAFILLS VLTVTPAHAA KVLILGDSLG  60
   61 ASYGMAEQSG WVALLQKNLP EHQFTNGSVS GETTAGGLRR LPALLDSVAP DLVVVELGGN 120
  121 DGLRGFPPTQ LENNLIQIIT LAKDSGAKVL LTEIMVPPNY GPRYTQKFTQ VYQDISKTQD 180
  181 IVLIPFFMQD IAPHPELMQR DGIHPNEKAQ AQIATWMQPW IEDALTQ

Type	Start	End	Confidence
Signal Peptide	1	49	0.99
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	227	0.99