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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119776430, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRALFCALL SLILLFGTVP ASAEHGSYHY HNTLEFQHFS SSDGLNQNTI TRLYTDKAGM  60
   61 LWAGSQDGLH YFNGQEFGVF LPDPSNTNSL SEGYITDIVQ DPEGLLWVST YTQGLNRLDL 120
  121 QTGKFTRYGE ADGLSELRVT RLAVIGDSLW IGTERGLFAM QRKSGQIRPI PLGNALTPKI 180
  181 TSLGNIEDEY LLVGTQAHGT YAISSNNIVK LKLPSTSPVN QIHSIGNVAY LAIGKELWQY 240
  241 EMDTHSAKIL WQSEPQGFFH GDIRDFTLAS AEEIWAIAPG AGLIELEKTD RWRARYHRND 300
  301 SRSFRDISDN NLMSVLLDPN GVLWLGGSYS GLDKINIRRQ YFDHLFDNSV ALPKQINMVR 360
  361 AIYQTREGVV WIGTEGAGIK TLKPNEDNYQ YHTHLFADAL NLVPEAISLV VRDIIQDKEG 420
  421 SLWFASNYGL GHLATSGAFR LLHPPEHDGQ GRTLALDKHD TLWVAFDEGL FYMPISGTEL 480
  481 KRFPLDETLG DKLAVRQILG LEFIDDWLWI GTLDGLIRLN PNTNDIQVFT HDPANSSSLG 540
  541 NNRIRDIYSA ANGDVWVGTH GGISILRQEQ DGWQIRHLTS NEGVPSDTIY AILEDKQGQF 600
  601 WFSSNAGISR YTPGEDSIIT FNKFEGLQEQ EYNGGVKFVG QDGYFWFGGI NGITRFLPEQ 660
  661 IPKSRQEPPL ALTSYSLGGK RTRILDLTTP PSVEMNFEDK VVSFEVTSLD FSYPGVDRFA 720
  721 YYLQGFDSQW HSAQAQAQIT YTNLSPGNYL LRVRHGLAAN PLGYQILTVP LTVVAPWYRT 780
  781 PPAYVLYTLT LVAILGWFWR ERRVKRRQRR EFETSIRTSE ERLKLALWAS GDGMWDWDIP 840
  841 SGQVFRTRMH PHTEQQLNGP VLLDRIHPED KPRVLHAIEQ HIDGSRAFYE AEYRIENKPG 900
  901 HWIWITDRGK VVERDKQGKP VRMVGTHKDI TSRKNAENEL RLSAQVLASM NEAVVVGGLD 960
  961 YRIASVNPAF SLITGFNPEQ VQGKHFLFLT HDRKQRHIYE AIEQQLLRNK HWAGELKIRT1020
 1021 RDQRAILIWL EINQVLDSKA EASHFVAVFT DITDRKKAEE DLRLLASYDP LTNLPNRTLF1080
 1081 QDRLDHALAQ AHRTGNMVAL LFLDLDRFKH INDSMGHHIG DLLLKAVAHR LQNCVREGDT1140
 1141 VARLGGDEFT IILEGVAKTK AATVIAEKLI RAFQTPFILE DQALNISPSI GISLYPMDAS1200
 1201 DSTSLVKYAD TAMYHAKSLG RNNFQFYTLR LNEYAMRHVQ LEAGIKQAIV RQELSLVFQP1260
 1261 KFRVSDGSIT GFEALLRWNS KELGPISPAE FIPLAEEIGI INQLGHWVVN EACRHMAQFA1320
 1321 AAGFDDLHVA VNLSARQLKA DILSTIEVAL AVAGLPAKCL ELELTESMIM KSPQESVAVL1380
 1381 QRLKALGVSL AVDDFGTGYS SLAYLKRFPL DTLKIDREFV RDISTDPDDA AITGAIIALA1440
 1441 HSLELNVVAE GVENEAQLEH LRKHGCDQVQ GFLLGKPMAA RDAMALLKSR TLNT

YRC Informatics Platform - Version 3.0
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