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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68516760, gi|...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQENTEKLST FRSRILFQIA VPLIIIMTGV SGVTGWLNYK AEEKAFFADL AEKADFAAKR  60
   61 LEFELTLAQQ DTQTLAFTLG HLDAKAQLQQ APFLYQLLTD RLARNDSFYG SAVAFVPGFT 120
  121 PGQERFAPYV FRQDLTIATL DIGKEAYDYT NGEWDWWTEA LKRPKGYWTA PYYDDGAGNI 180
  181 QMITFSQPFG DEEPLGVVTT DLALSSLPIR LGIDPKKLLV LDARGTLIYH PDNNLTRNAT 240
  241 ISDWLVKDVA SEEAAKKVLE GEAQEVALKD LNGVQYLASI AKVSPLAWRV LVITPQTELV 300
  301 ETFLKGFSSL TLSLLVLALI LLVTSYYSAK RLTEPLEALE TGIVDFSKGL IKRLQKPEGV 360
  361 VREIATLSHK FNEMAEVLEE REQALLDSRG NRFATLIDGM SDKSFYCSMT PDGNIDQVSA 420
  421 GVEKVLGISP EVLKRKYQRL FSSNAINEQN WQFMEMALRG EAVPPHQVEM AGADGSLRRL 480
  481 DLFMQPLLDD EGQLISVEML FNDVTEQFSA AAWSNAVLEA APEAMLIVDE SGQLVFSNSR 540
  541 CQELFGYSGE EMLNLNIDAL IPENERHGHQ GKRQLFIEGG RDKVMANGKP LHALKCGGEQ 600
  601 FPVQIGLSLL PADSRGQRQV AASIRDLTEQ LAVERQIRES ESRFRGLVSN IPGAVYRTRI 660
  661 NGTWTMEYVS DNITELTGYP AWHFIESKKR SFGSLILDED AERCDAIISG ALAEQHAFEV 720
  721 EYRIRHRDGS LRWVHEKGKA SYDEDGNPVW FDGSLNDITE SKLAQERIEQ SREQLETITE 780
  781 SVPSTVYQLV WRSERDRRFT FLSSAAMATL GFHRNEVLDN FELVAERIVE EDRGEIIQML 840
  841 AGRHGMQWTK AFRYHFPSGE LRWLEAGARG SKQQDALVWN GYLMDISGRK RMETELAQSE 900
  901 AHFRALFDNA GIGIVNLDDR GIIKDCNGQF VSDLGISSDS LKRKQLADLM HPEDRALATG 960
  961 LYQALAESEQ GSISGEWRML DGDGELMWMA VIASVLEEGD GGERSVVMSI ANITRLKLLS1020
 1021 DELMAAKEDA DAANQAKSDF LANMSHEIRT PMNAIIGMSQ LCLQTELDRK QRNYVEKIER1080
 1081 ASKSLLGIIN DILDFSKIEA GKLDIEVVPF QLDTILEDLG DMFSVKAADK QLELLFSVAP1140
 1141 GVPTHLEGDP LRLSQVLINL MNNAIKFTER GEVMLSISEL ARDEDQVQLK FAVRDSGIGL1200
 1201 TAEQQAKLFK SFSQADTSTT RKYGGTGLGL AICKQLVELM GGEIGVDSQF GNGSTFYFTV1260
 1261 SVKVAQNAQL NVEQELEGMA VLVVDDNSTA RDILRTTLQS MGFSVDSARS GMEALEKCAE1320
 1321 RDYRIALIDW KMPEMDGTET AARMRELKQP PLILMVSAHA NSEFIDKVEE MGINGYITKP1380
 1381 ISASRLLDGI MSALGRQGHK PVRRKAQPMD AQKLSGLKGK RILLVEDNEM NQEVASEFLE1440
 1441 QVGVVLSIAD NGQIALEKLG QQSFDLVLMD CQMPVMDGYQ ATRELRKLPG LAELPVVAMT1500
 1501 ANAMAGDKEM CLLAGMNDHI AKPIEVGILY QTLLQYLCPE AKGLESADAD AAADQEVTSL1560
 1561 TSWPEHEDLD IDRGLQLVQN SERLYRRILE RFVTSQAQAG KKIRKALALG QQEDAVRLAH1620
 1621 TLKGVAGNLS ADTLVEEARQ LEAKLAQGEA CEAELEAVET RLVTIVAAIE RWMTEGVEEQ1680
 1681 GVESGEPLSA DALKEVLNTL VTQLEDADAD AVSTLESLSG QVVAGIWARL KPVSQMVAGY1740
 1741 QFDDGADLVR ELIQELETDG ESA

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