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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|145563422, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRSFLKMS AAMGCAATVT GCNSGSSDVN VVPPKPPIGD EIQTWSSCLV NCGSNCPIKV  60
   61 FSRDGVITRI EADHETNDEY GNHQIRACAR GRSLRSRTYA PDRLRTPMKR VGKRGEAKFV 120
  121 PITWDEAAST IASEIQRIAS SYGNKSILKH YGTGAYYGFA SSACFDRVLN LNGGFLKIYG 180
  181 NYSWAQQNEA AAATGFGSTS GSSLTALYDS DLFLGIGYNP SEMRQSGSGE GYDFLKALEA 240
  241 NSNLEVIMVD PRYTDSMAGK ESQWLPIRPG TDAAFAEAIA YEMISSGWVE THSKAFLDKY 300
  301 CVGFDKASLE KLVEEFTASG DPKKTQYLPY IDVEDNYRDY ILGEGKFVDK GPRTPAWAAK 360
  361 ICGISEANIK SVASKIMNAK APFIVTGAGV NRHANGEQAM RACYMLSFLT GKVGQPGVSN 420
  421 GALPYQGSLN RAGMSGGSNP VKESISFFTW AEAIERGHEM TARKDGIRGT ADLDTPLGAD 480
  481 IKAVFAINSN ALINQHSDCN GTAKILEDDT KCELIVVCDC WMTPSARYAD ILLPDTTWLE 540
  541 SNDLVNDSYA SGIMGYLVAM KAAVKPMWES ISMFEMGRLI AAKMGKEAEY TEGKDEAAWL 600
  601 EALYQKTRTD SSNVNAQPSF PSTYTEAQQI GVFRAFSKTP VLALDSYING GKAVSTPSGK 660
  661 IEIYSLSMAQ KGKDWIFNPN VKGDYISAIP MYQATWEGYD DEDTKDDYPL QLMGYHTKGR 720
  721 THSSYHNVPW LREAAEDAVW MNPTDAYGRG LRNGDKVQMW NDRGTVELPI RITPRVAPGV 780
  781 VALGQGAWYQ PDIARIGRSG HPIDVGGCIN TLTRYQPSPF AKGNPQHTNR VQIVKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle