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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|82471109
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESCNCIEPQ WPADELLMKY QYISDFFIAL AYFSIPLEII YFVKKSAVFP YRWVLVQFGA  60
   61 FIVLCGATHL INLWTFTMHS RTVADVMTTA KVLTAVVSCA TALMLVHIIP DLLSVKTREL 120
  121 FLKNKAAELD REMGLIRTQE ETGRHVRMLT HEIRSTLDRR TILKTTLVEL GRTLALEECA 180
  181 LWMPTRTGLE LELSYTLHQQ NPVGYTVPIH LPVINQVFTS NHAIKISPNS PVARLRSLAG 240
  241 KYMPGEVVAV RVPLLHISNF QINDWPELSV KRYALMVLML PSDSARQWHV HELELVEVVA 300
  301 DQVAVALSHA AILEESMRAR NLLIEQNVAL DLARREAETA IRARNDFLAV MNHETRTPMH 360
  361 AIIALSSLLQ ETELTAEQRL MVETILKSSN LLATLINDVL DLSRLEDGSL QLDIGTFNLH 420
  421 SVFREVHNLI KPVASVKKLM VMLNLAPDLP VYAVGDEERL MQILLNVVGN AVKFSKEGSI 480
  481 SVAAFVAKVE SLRDFRAPDF FPMPSDCHFY LRVQVKDSGS GISPQDIPKL FTKFTQTQPL 540
  541 ATRNSGGSGL GLAICKRFVN LMEGHIWIES EGLGKGCTAS FIVKLGFPER SNESKPPFAP 600
  601 KGQANHAQTN FPGLKVIVMD ENGVSRTATK GLLVHLGCDA TTVSSSDECL RVVSQEHRVV 660
  661 FMDVNTNGYE LAVRLHEKFA KRHERPLIVA LISTTDKAPK KNCMRVGMDG VILKPLSVDK 720
  721 MRSVLSELLE HRVLLGPM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle