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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77810523, gi|...
Protein type: Transmembrane
Type Confidence: 0.75
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISGKTIISV IHYEPCLSKP FAEIFTCFNF VFDDQYFHLA PRLAAKVILL RPRSLSTDYS  60
   61 KNDNIVIILS PDKQRAFGKV PLSILWTSFE PFTRSAWTRS VMFKLKLLSI STIFILTGCV 120
  121 SLAPEYQRPA APVPQQFSLS RNSLTPAVNG YQDTGWRNFF VDPQVTRLIG EALANNRNLR 180
  181 MAALKVEEAR AQFNVTDADR YPQLNASSGI TYSGGLKGDK PTTQEYDAGL ELRYELDFFG 240
  241 KLKNLSDADR QNYFASEEAR RAVHILLVSS VSQSYFSQQL AYEQLRIARE TLKNYEQSYA 300
  301 FVEQQLVTGS TNVLALEQAR GQIESTRAEI AKREGDLAQA NNALQLVLGT YRALPPEKGM 360
  361 KGGEIAPVKL PSNLSSQILL QRPDIMEAEY QLKAADANIG AARAAFFPSI TLTSGLSASS 420
  421 TELSSLFTPG SGMWNFIPKI DIPVFNAGRN KANLKLAEIR QQQSVVNYEQ KIQSAFKDVS 480
  481 DTFALRDSLS QQLESQQRYL DSLQITLQRA RGLYASGAVS YIEVLDAERS LFATQQTILD 540
  541 LTYSRQVNEI NLFTALGGGW VE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle