YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77809063, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSKLRTFR SRILSHIALP LILIMTGVYG VNSWFKYQAL EKTLYEKLEQ QASHSASRLQ  60
   61 LILEHAQANT QGLADFIGFL SNKEGFNDID NVKQVLMNRL ERNPDFFGTA VAFKPDVFPN 120
  121 RKLFSPYVYR AGEALHYLDI GAEGYDYTDG SWDWWTNAIN QANGYWSKAY FDEGAGNVLM 180
  181 VTYSAPFGVL DHYFGVATVD LALDRLPSQL GVASNRLVIL DDQERLIFHA DRDKILSTTS 240
  241 AQWLDKSMKH NGDFWLLQEK NLDGQARFVD VQGISYLASV ATVPKLKWRV VVMVPEQELF 300
  301 TALLDDIASI VLDLSLLTLL LLLTCYLTAK RLTRPLELLE SGILAFGQGK AQQLVIPKGA 360
  361 VSEIVTLSQT FNQMAELLAE REQAILDSRG NRFARLIDGM SDKSFYCSLE PSGQLAQVSD 420
  421 GVTKVLGIAP ELLKRKYQRL FSVNPLNEKN WQYTDLALKG QNVPSHQVEM IDAQGHLRRL 480
  481 DVFMQPLVSE TGELMSVEML FTDVTEQFSA AAWSNAVLEA APEAMLIVDE KGEIIFSNSR 540
  541 CQQLFGYHAE AMLGLQVEAL LPQALGSEHV RYRQQFLRDG RDRSMANARH VRAVKADGNE 600
  601 FIAEIALSIL PADVDGSRQV AASIRDMTQK LAIEQKIRDS ELRFRGLVAN IPGAVYRTRI 660
  661 GEVWVMEYIS DNIADITGYA ASQFIENRQR NFSSLILEED RPLCHQHIDK ALAQQETFEV 720
  721 EYRIRHRDGS IRWVHEKGKA SYNEEGFPLW FDGSIDDITE SKLVSVELEA SRQQLTNITE 780
  781 SIPCTVYQLR WRSPSDRAFT FLSGAALPML GLQRDNLMND FNIIAERIFD EERPEVVRAL 840
  841 AGKSDDKLQW IREFRYRHPN GSIRWMEAGA SGHVESDDVI IWNGYVMDIT QRKTMEQELA 900
  901 LSEAHFRALF DGATIGIINI DAKGLILDCN DQFCEDIGRA REELRNIPIF DVLSPQDREI 960
  961 AKAQFKDLAD GKVDHYRGER SFIRPSGEPM WMTVNVSALF DCHHQFESAV VSMVDMTELK1020
 1021 LLSDELLIAK EEADAASKAK GDFLANMSHE IRTPMNAIIG MSQLCLQTAL DKKQKNYVEK1080
 1081 IERASQSLLS IINDILDFSK IEAGKLDIDA VPFQLDTMLE DLSDMFSEKV VHKQLELLFA1140
 1141 VAPNVPRHLF GDSLRLGQVL INLMNNAIKF TERGEVLLSI NLVEQQNDDV TLRFSVRDSG1200
 1201 IGLTDEQQAK LFKSFSQADT STTRKYGGTG LGLAICKQLV ELMGGNIGVE SQFGHGSTFY1260
 1261 FTVKLQISSG QKLTVGQELE GMSVLVVDDN ATARDIMRTA LESMGFNVDT VRTGEEAVSR1320
 1321 CIQHEYAVAL IDWKMPSMDG LEAARQIQQQ AKAAPRILMV SAHANHEFLT QIEQLGLAGY1380
 1381 ISKPISASRL LDGIMNALGR AGILPVRRHN EALDPQLLLP LKGKRVLLVE DNEMNLEVAT1440
 1441 EFLEQVGIIL SIATNGQIAL DKLSQQSYDL VLMDCQMPVM DGYQATMAIR QRPELAHLPV1500
 1501 IAMTANAMAG DKEMCLRAGM NGHIAKPIEV NILYQTLLKY LGDDKSQSTL LENAQVNDIK1560
 1561 NKPINTDPAT MLKWPEHPEL DIDRGLQLVQ HSARLYQRIF DRFVSSQRNV VEMLRKAVSA1620
 1621 NKQEDAVRIA HTLKGLAGNL SSSKLVELAR LLELHLSENQ PYQDELEQIE KLVASICEAI1680
 1681 EKVKPELEDI SEIGIEPLSS EQLIIALKHL RQSLEEADAK AVELINALKP QVSTKLWQQL1740
 1741 SPVLAMINQY QFDEAVDLID EVLAELNSHS Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle