YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|146292618, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLIATAVL AASFSLTAGM VSAADAPKSI DQLLQQVKVD RAAEGKVNSK REQEFQAERG  60
   61 DKAAMLKREK DALAAEKQRG KELNQAFLDN ERKIAQLEED LKTAQGDLGE MFGVVKGEAG 120
  121 DFAGKLVSSN ISAQYPNRDK FIADLGARKQ LPKIEELEQF WQEQLFEMAQ SGKVVKFEGS 180
  181 VTGIDGSVKN TTIHRIGAYN LTADGKYVVY NPELGLIQEL SQQPEGYQVS AVGKWEQATA 240
  241 GTAPFYIDPA RGVLLNIFTN KASFEDRLEA GGTIGYIIIA LLVLGLLISI ERLVTMTIIG 300
  301 AQVNSQRKNI DNPGNNALGR ILKVYQENKD VDVETLELKL DEAILKETPA LESRISIIKV 360
  361 LAAIAPMMGL LGTVTGMIAT FQSIQLFGTG DPKLMAGGIS MALITTVQGL VAALPLMLMH 420
  421 AIVVARSKSI VQVLEEQSAG IIAAHAEKRA D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle