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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68553334, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFCDPVSFRS PIPSFRSRQA EVFLHREAAS CRSCSVSRQE RRQLVCNDVC DFPMALVDAV  60
   61 RGLQKQVSSE FSAAGAASIF RSILSMNYGF VIDGRKCIGC HACTVGCKSE NQVPLGVNRT 120
  121 WVKYVEKGKF PDTRRYFTVL RCNHCEDPPC VNICPVEALQ KREDGIVDFD KRRCIGCKAC 180
  181 GQACPYGALY IDPESHTSAK CNYCAHRKEV GMKPACVVIC PQQAIVSGDL DDPHSQISQL 240
  241 VATEQTVVRK PEKGTSPNVF YINGDGASLD PLQTEIGRPY LWSEQSRGVG HFVGKELQGS 300
  301 LRSDTGKPDD GTAARRVYDA PSKGVVWGWE VPAYVWSKGI SSGIFMLLFV LTVFLSAPLS 360
  361 APMQWASWAV SLVFLGFTGA FLIRDLDRPD RFSSVMLRPQ FKSWLVRGGY SIGGFGALLA 420
  421 LWGAARLLHS PLLETVSLWG GALFALITSV YTAFLFASAK GRDFWQSPVM VIHMLVTSLV 480
  481 AGASAMLLLA VAFGAEASIQ SILTGGIAGG VMLNIVIMLS ELFGRHPSKQ AEATAHLMTH 540
  541 GALKQQFWGG CIALGHLAPL VLLLFGAGPF VAVAAALLAL SGVYYTEKLW VKAPQLISLH 600
  601 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle