YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77956756
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKWMAVIAA LLLSACSSEP SKTYYQLPAM SAPATASSSV ASRQLWIEHV GVADYLAATG  60
   61 VVYQTNDVQY VIATNNLWAS PLDQQLQQTL VTNLSNALPG WLVSSQPLDS DQDVLNVTVT 120
  121 GFHGRYDGRA IIRGVWILKH QGQLIKQPFD LELKQSEDGY DALIRTLAAG WQQEAGTIAA 180
  181 QLQRVK

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	186	0.99