YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238784907, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKFKSIAA VSALIGTLAL VGCGPAEKDP NHIKVGVIVG AEQQVAEVAQ KVAKDKYGLD  60
   61 VELVTFNDYV LPNEALSKGD IDLNAFQHKP YLDQQIKDRG YKLVSVGNSF VYPIAGYSKK 120
  121 IKSLEELQPG SQVALPNDPT NLGRSLLLLQ KVGLIKLKEG VGLLPTVLDV VENPKNLKLV 180
  181 ELEAPQLPRS LDDQQIALAI INTTYASQIG LTPAKDGLFV EDKESPYVNL IVAREDNKDA 240
  241 ENVKKFVQAY QSDEVYDAAN KAFNGGAVKG W

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	271	0.99