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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238715806, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYQQLVNDI QSRLDKTSQL YQQQNSNEAR TTVQMAYFEL FENLEGPIRI NISAQKSYQM  60
   61 EAAFGEIRRM IGEGRPQAEV DNKINWLKSE LAGVLPVLTD GHKLTAEQQH AAYENSDIAV 120
  121 YWQQSFKIID DLLAQAISEY QAGNFAAASQ SVQQAHYQGF KNSEMEMSVR GNRSAQDAAA 180
  181 INQQFTALID LTSKPDQMTE VAYRVTGLLQ TIEEILPGLP TTREQQQVSA DQPIVGQSSA 240
  241 AGANTDEQAN ADWAAVSDKI NQAITAAIGQ YQKGQTAPAM LAVQDTYFDL FEASGMENKV 300
  301 GSRDAAFKST LEGHFTRLVS LMKAGQPAEQ LQAEAVALQN DLSSAVVMLG GGDETNWSLF 360
  361 IYSLLIIVRE GLEALLIVAA IVAYLVKNNH QDKLPLIRQS VVVALIASVL TAFVFQWLFA 420
  421 NSGQSRELLE GFTMMIAVVM LFSMSYWLLS KTEARQWKAY LEGKFSKSLS SGSMIGLWLT 480
  481 SFLAVYREGA ETVLFYLALM GDASSTSGHL SILAGFGVGS VFLLVAYLVM RFTVVKLPLK 540
  541 PFFMFTGGFM YLMAFVFAGK SVLELIEGKL FEPTLLPGVP EISWLGIYPY LETLIPQGIL 600
  601 LIAALIALWV MQRRGHAIPA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle