YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77960332
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVVLGTALI SGSVLAEDTL LNKASDAVDS TGAKLDSSMK KVDNYMGDSA ATAKVKSALL  60
   61 EEKSLKSTDI SVETSHGVVT LSGFVTSQAE AETAVDIAKN VEGVKSVSDK LHVKDQKTQS 120
  121 VSEYAGDAAT TSSIKAKLLA DDIVPSRKVK VETTEGVVQL SGSVENKAQS ERAESIAKAV 180
  181 DGVKSVKNDL SIKP

Type	Start	End	Confidence
Signal Peptide	1	16	0.98
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	194	0.99