YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77962897
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVALLFAM IICLPAVSFT SSASEPVAVS KELKQQLLGS SVYIQIFKEE RTLELYARLQ  60
   61 GEYRLVQSYR ICEFSGGLGP KRREGDFKSP EGFYTIDTRH LKPDSKFYRA INIGFPNDYD 120
  121 KSQGYSGKYL MIHGACKSIG CYAMTDAYMD EIFNYVQTAF IFGQEKVDIS IYPFRMTEQN 180
  181 MQRHRNSSDY NFWRQLQPGY AYFAKNRMPP SVSVINGQYV LSRPPVSSAP ASQYAVTHSN 240
  241 LLTKTE

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	246	0.99