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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238796617, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFGSATVYG ADGFVVKDIH FEGLQRVAVG AALLNMPVRV GDTVSDDDIG  60
   61 KTIRALFATG NFEDVRVLRD GDTLIVQVKE RPTIASITFS GNKAVKDDML KQNLEASGVR 120
  121 IGEALDRTTI SSIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFT EGVSAKIQQI 180
  181 NIVGNHSFTT DELISRFQLR DEVPWWNVVG DRKYQKQKLA GDLEILRSFY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYITINI TEGDQYKLNS VVVSGNLAGH QSDADKLVKI ESGELYNGSK 300
  301 VTRMEEDIKK MLGRYGYAYP RVVSQPEIND ADKTVKLHIN VDAGNRFYVR NVRFEGNDTS 360
  361 KDSVLRREMR QMEGAWLGND QVEAGKERLN RLGYFETVDV ETQRVPGTAD QVDVTYKVKE 420
  421 RNTGSLNFGI GYGTESGVSF QVGVQQDNWL GTGNTVGING TKNDYQTYAE FTLTDPYFTV 480
  481 DGVSLGGRIF YNDFKADNAD LSGYTNSSYG VDGTLGFPIN ENNSLRVGLG YVHNDLSDME 540
  541 PQVAMWRYLD SVGQDPNLTD RAGFTADDFT LNLGWTYNNL DRGFFPTKGV KSSVNTKVTV 600
  601 PGSDNEFYKV TFDTSAYQPL DEDHSWVLLG RGRLGYGDGI GSKEMPFYEN FYAGGSSTVR 660
  661 GFRSNNIGPK AAYYNANGTI RDSTDAVGGN AMAVASLELI TPTPFISEKY ANSIRTSFFI 720
  721 DSGTVWDTNW ENTAETRAAG IPDYSKASNI RVSAGVSLQW MSPLGPLVFS YAKPVKDYEG 780
  781 DKSEQFQFNI GKTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle