YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77963235
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSLLLLPM LIAALTGLAH ADDTAIQQTL KKLDIQQADI QPSPIPGLST VMTESGVLYI  60
   61 SADGKHLLQG PLYDVSGTQP VNVTNQSLVK RLEALSGEMI VYKAPQEKHV VTVFTDITCG 120
  121 YCHKLHEQMK DYNALGITVR YLAFPRQGLS SQAEKDMRSI WCTADRNKAF DDAMKGTEIS 180
  181 PATCKTDISK HYQLGVQFGI QGTPAIVLQN GTVVPGYMEP KEMLQMLNKH QASVKAAG

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	238	0.99