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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77972718, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMKKLLIAS LLFGSATVYG ADGFVVKDIH FEGLQRVAVG AALLNMPVRV GDTVSDDDIG  60
   61 NTIRALFATG NFEDVRVLRD GDTLIVQVKE RPTIASITFS GNKAVKDDML KQNLEASGVR 120
  121 VGEALDRTTI SNIEKGLEDF YYSVGKYSAS VKAVVTPLPR NRVDLKLVFT EGVSAKIQQI 180
  181 NIVGNHSFTT DELISRFQLR DEVPWWNVVG DRKYQKQKLA GDLETLRSFY LDRGYARFNI 240
  241 DSTQVSLTPD KKGIYITINI TEGNQYKLNS VVVSGNLAGH QSAADKLVQI EPGELFNGSK 300
  301 VTRMEEDIKK MLGRYGYAYP RVVSQPEIND ADKTVKLHIN VDAGNRFYVR NVRFEGNDTS 360
  361 KDSVLRREMR QMEGAWLGND QVEAGKERLN RLGYFETVDV ETQRVPGTAD QVDVTYKVKE 420
  421 RNTGSLNFGI GYGTESGVSF QVGVQQDNWL GTGNTVGLNG TKNDYQTYAE FTLTDPYFTV 480
  481 DGVSLGGRIF YNDFKADNAD LSGYTNSSYG VDGTLGFPIN ENNSLRVGLG YVHNDLSDME 540
  541 PQVAMWRYLD SVGQRPGYTG REGFTTDDFT LNLGWTYNNL DRGFFPTSGV KSSVNTKVTV 600
  601 PGSDNEFYKV TFDTSAYRPL DEDRSWVLLG RGRLGYGGGI GSKEMPFYEN FYAGGSSSVR 660
  661 GFRSNNIGPK AAYYANNGAT VNNSTDAVGG NAMAVASLEL ITPTPFISEK YSNSVRTSFF 720
  721 IDSGTVWDTN WENTAETRAA GIPDYSKASN IRVSAGVSLQ WMSPLGPLVF SYAKPVKDYE 780
  781 GDKSEQFQFN IGKTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle