YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238787226, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTQTGNGK EFIVKKWLCA AGLGLALAAS ASVQAADKIA IVNVSSIFQQ LPARETVAKQ  60
   61 LENEFKGRAT ELQGMERDLQ TKMQKLQRDG STMKASDRTK LENDVMKQRE TFSTKAQAFE 120
  121 QDNRRRQMEE RNKILSRIQD AVKLVASKGG YDVVIDANAV AYADSSKDIT ADVLKQVK

Type	Start	End	Confidence
Signal Peptide	1	35	0.99
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	178	0.99