YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238787882, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMKKLATLI SVVALSATVS ANALAKDTIA LVVSTLNNPF FVSMKDGAQK EADKLGYNLV  60
   61 VLDSQNNPAK ELANVQDLTV RGTKLLLINP TDSDAVGNAV KMANQANIPV ITLDRLANAG 120
  121 TVVSHVASDN RFGGKMAGDF IAKKAGTDAK VIQLEGIAGA SAARERGEGF KQSMEKNKFQ 180
  181 LLASQPADFD RTKGLNVMQN LLTAHPDVQA VFAQNDEMAL GALRALQTAG KTDVLVVGFD 240
  241 GTDDGIKAVE SGKMGATIAQ RPDQIGVIGV QTADKVLKGE KVPAVIPVDL KLVTKQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	296	0.99