YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238789654, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVLIAGTAI IATRFIGVVL LVAELGWSGT GSFIDESLQT WGSGFVFTAS VLLLLLEIVC  60
   61 GVAVCLRQNW ARWSYLLCQL LVIVYLLMVS LDWLSLDVDV FRVEGDTGAE ILHSLLLQKI 120
  121 PDVVIIGLLF FPWHRYFRAS K

Type	Start	End	Confidence
Cytoplasmic	1	9	0.87
Transmembrane Helix	10	30	0.89
Non-Cytoplasmic	31	43	0.81
Transmembrane Helix	44	66	0.91
Cytoplasmic	67	74	0.81
Transmembrane Helix	75	94	0.94
Non-Cytoplasmic	95	114	0.90
Transmembrane Helix	115	134	0.89
Cytoplasmic	135	141	0.78