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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77975114, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPLLTPFS LPPFSAIHPE DIVPAVKSAL DECRQAVERV VAQPGPFTWD NLCQPLAESD  60
   61 DRLSRIWSPV GHLNSVKNSP ELRAAYEQSL PLLSEYGTWV GQHKGLYQAY VSLKEGPGFD 120
  121 ALTAPQRKAV ENALRDFQLS GIGLEPEQQK RYGEIVARLS ELGSTYSNNV LDATMGWSKL 180
  181 ITDVEQLKGL PESALAAAKA MAEAKEQDGW LLTLDMPSYL PVLTYADNAQ LREEMYRAFA 240
  241 TRASDQGPNA GKWDNSEIMA EILTLRHELA QLLGFNSYAD KSLATKMAES PQQVLGFLND 300
  301 LAKRARPQAE EELAQLRAFA EKHYGVSELA AWDITYYSEK QKQHLFSISD EQLRPYFPEQ 360
  361 RVVEGLFEVV KRIYGITAKE RHDVDTWHPD VRFFELFDAS GELRGSFYLD LYAREHKRGG 420
  421 AWMDDCVGSL RLANGQLQKP VAYLTCNFNG PVGGKPALFT HNEVTTLFHE FGHGLHHMLT 480
  481 KIDTAGVSGI NGVPWDAVEL PSQFMENWCW EPEALAFISG HYETHEPLPQ EMLDKLLAAK 540
  541 NYQAALFILR QLEFGLFDFR MHYEFDPLTG AQILPVLYEV KKQVAVVPSP TWGRFPHAFS 600
  601 HIFAGGYAAG YYSYLWAEVL SADAFSRFEE EGIFNAATGQ SFLDNILSRG GSEEPMTLFK 660
  661 RFRGREPQLD AMLRHYGIKG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle