YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238788664, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKPSDTVS WFQVLQRGQH YMKTWPADKR LAPVFPENRV STATRFGIRF MPPLAIFTLT  60
   61 WQIALGGQLG PAIATALFAC GLPLQGLWWL GKRAITPLPP TLLQWFHEVR NKLAEAGQAV 120
  121 APIEQTPTYQ SLADLLKRAF KQLDKTFLDD L

Type	Start	End	Confidence
Cytoplasmic	1	45	0.95
Transmembrane Helix	46	65	0.89
Non-Cytoplasmic	66	71	0.74
Transmembrane Helix	72	91	0.92
Cytoplasmic	92	151	0.96