YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77975730, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKKSDAIT LALGLLLASQ AVAHQAMAAD LSAQVNQFFQ QQYPAKESQV KVVIKTPQNQ  60
   61 WPQCEMPEIT LPTNARPWGN ISLSVRCDGQ RRFIQTQVQV SGHYAVAARR LPSGAKITPE 120
  121 DIEMKQGRLD TLPPGALLEP HFAQGAVSLR QINAGQPLTR NMLRRLWVIK AGQDVQVLAQ 180
  181 GEGFNVNSNG KAMNNGAVQD NVRVRMASGQ IVSGTVAEDG TIRIML

Type	Start	End	Confidence
Signal Peptide	1	28	0.94
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	226	0.99