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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|77976613
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQRNLLLI ALLFVSFMIW QAWQVDNSPQ PAAQTTQQTA NTATGDKASQ AVPGSGQGQL  60
   61 ITVKTDVLSL TINTRGGDIE QANLLAYPDA LGSDKTFELL ETTPAFVYQA QSGLTGKSGP 120
  121 DNPANGERPL FEAPQTSFVL ADGQDELRIP LTFTGKDGSV FTKTFVLKRN DYAIGVDYHV 180
  181 KNASAAPLEL TLFGQLKQSI NLPKHRDTGS NNFALHTYRG AAYSSDDTKY KKYSFSDIED 240
  241 KNMDITTKGG WVAMLQQYFA TAWIPVANET NTFYSSDLGN GLAAIGFKGA PVIIQPGEQK 300
  301 QLGATLWVGP EIQDKMAVIA PHLDLTVDYG WLWFISQPLF KLLKFIHSFV GNWGFSIIVI 360
  361 TFIVRGIMYP LTKAQYTSMA KMRLLQPKLA AMRERIGDDK QRMSQEMMAL YKAEKVNPLG 420
  421 GCLPLVIQMP IFLALYYMLM SSVELRHAPF ILWIHDLSAQ DPYYILPILM GITMYFIQKM 480
  481 SPTTVTDPMQ QKIMTFMPVI FTVFFLWFPA GLVLYYIVSN LVTILQQQLI YRGLEKRGLH 540
  541 SRDKKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle