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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|238792495, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYPQLVNDI QSRLDKTSQL YQQQNNNEAR TTVQMAYFEV FENLEGPIRI NISAQKSYQM  60
   61 EAAFGEIRRM IGEGKPQADV DSKIDWLKSE LTAVLPVLAD GHRLNAEQQH AAYENSEIAL 120
  121 YWQQSFKIID DLLAQAISEY QEGKFAAASN SVQQAHYQGF KNSEMEMSVR GNRSAQAAAA 180
  181 INQQFTALID LTRKPDQMTD VAYRVTALLQ TIEDTLPGLP TTREQQQVTA DQANVGQSSA 240
  241 SDANADGQAN ADWAAVSSKI DQAISRAIGQ YQKGQTTPAM MAVQDTYFDL FEASGMENKV 300
  301 GSRDAAFKST LEGHFTRLVS LMKAGQPVEQ LQAEAVTLQK DLASAVEMLG GGDETNWSLF 360
  361 IYSLLIIVRE GLEALLIVAA IVAYLVKNNH QDKLPLIRQS VVVALIASVL TAFVFQWLFA 420
  421 NSGQSRELLE GFTMMIAVVM LFSMSYWLLS KTEARQWKAY LEGKFSKSLS SGSMVGLWLT 480
  481 SFLAVYREGA ETVLFYLALM GDASTTSGHL SILAGFGVGC VFLLAAYLVM RFTVVKLPIK 540
  541 PFFMFTGGFM YLMAFVFAGK SVLELIEGKL FEPTLLAGIP EISWLGIYPY LETLIPQGIL 600
  601 LIAALVALWV MQRRGRTVLA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle