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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: OPGH_SHESA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVSENSVLE TEVLVGGSAM PNERPGAMEP QSLSQMPEGF PRRSTVANGV RSKVSRRFFV  60
   61 VGGALALSAF AIYEMGAVFS IGGITPLEYL MLALFAINFC WIALAFCSGI AGFFMLLKKP 120
  121 KPNELEQTEL HTRTAILMPT YNESPDRVFS AVSVMAEALS QTGHGHAFDW FILSDTTDPE 180
  181 IALLEEQAFL VLRQETHKHS RVYYRRRRKN VARKAGNVAD FCRRWGSRYD HLLVLDADSL 240
  241 MESSTITGLA QRMQADPDAG LIQTIPSLIN GTTLMARLQQ FAARIYGPVI GTGLGWWVQK 300
  301 EGNFWGHNAI IRTEAFMGAA GLPNLKGKPP FGGHILSHDF VEAALIRRAG WSVVIAYDLP 360
  361 GSYEECPPSI VDLAVRDRRW CQGNLQHSRI LPTKGLHWVS RLHLMTGIMA YLSSPFWLLL 420
  421 ILTGLMLALQ AHFIRPEYFT DQFSLFPTWP IMDSDRALRL FYITMGVLFG PKIFGVLLLL 480
  481 KDGNFARSVG GRIKAILSVI FEVILSALIA PIMMFIHCGA VMSILMGRDS GWSPQRRDDG 540
  541 SMPWLTLIYR HRWHMLAGVM LGYAAILDSL TLLAWMSPAL IGLWLAVPIS AWTGSIKIGE 600
  601 FFKRIGILAT PEERNPAPIC IRAQEARAAY QAHIEQPWTL AQVLKDPALM ELHLAMVDKQ 660
  661 PLRAAGTPIE PVEAIVHVKV HEAQCQQSAL ALFNRQEMAL VLANPLMLRS LQKLPEQFVP 720
  721 EDLVSFC

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