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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|117614593, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.65
Topology Confidence: 0.25
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVILSHPV LKLFFGALCL LSLCGAPLTG SALPLNAANT QLKFEHIRSE EGLNQNTITS  60
   61 LFMDSAGMLW IGTQDGLHSY NGYNFNLFIH SPNNPSSISE SFISDIIQDA EGYLWIGTFS 120
  121 QGVNRLDLNT GTFERFGLEQ GLTDPRVTKL NIVGNTLWIG TQGGLFSLSI KTQRITQVSL 180
  181 GNSVEPHITS LANVENTYLL AGTRASGTFA LSSNAITRLN VPQDLTAYQI KANSTRAITL 240
  241 ALGNQLWHYD LVSHQGSILW QAEDDIPYLK DFIQTPQGQF WVVGPEAGLI QLEREAGRFV 300
  301 AAYHKYDMQR PNSISDNNIL CLLQDTFGNL WLGGSYSGLN KINTRRQYFQ HLFEYTTELP 360
  361 QQSNNIRTIF RSQDKALWIG TEGAGLKRLA FNAKQYEHYT SAFAKALGKE TRHLNLVLRA 420
  421 ITQDRQGVLW FASNYGLGRL TPSGEFTLLK LTQSQDPASE ANYIRSLELD AQGQLWVATS 480
  481 HALYRKALEK DEFTSVPLTD IENFHPTQNL LLILRADGNT LWIGSLNGLV KLDMQTGQGQ 540
  541 AFYHDPENKN TIINNRIRDI LVASNGDVWF ATHGGISRLS AQAEDMVFRD YTREQGLPSD 600
  601 TIYALLEDDE HHIWFSSNAG IGKLNPSNGK IINFNEQEGL QALEFNGGVK LKDSDGDLWF 660
  661 GGINGINRFN PKAIPDQRSE AKVALTAYKI AGKRHTILDL SHPPKILMNY DDQLVSFEVT 720
  721 SLDFSYTGKN RFSYYLEGFD NQWHDLPSGN EITFTNINPG HYVLHVRHSL EYNSEGSYAL 780
  781 LVDLTVKAPF YRSQIAYALY VLLALGLMGW IVLWRKQKRE QQQEFETSIR ASEERLKLAL 840
  841 WASGDGMWDW NIQEQQVYRT HTDIPVSQWS SHTLLHDNAH PEDRERFKQV LTDHLQGHTP 900
  901 FFEMEYRIEH SPGNWLWILE RGKVVETNNQ EQPMRMTGTT RNITSRKLIE NELVLSSQVL 960
  961 NSMNEAVVVA GLDYRIRSVN PAFSAITGYS ERQISDKYLI HLAYSRQQRD LFNSIEQQLL1020
 1021 RHKHWAGEIW IRNRARKAIL VWLEINQVID VKGETSHFVA VFTDITERKK AEEDLRFLAS1080
 1081 FDTLTGLPNR TLFQDRLNHA ISQAHRSNNI VALLFLDLDR FKHINDSMGH HIGDLLLKAV1140
 1141 AHRLQNAVRE GDTVARLGGD EFTIILEGVA KTKAATLISE KVLKAFQAPF LLDDKSLTIS1200
 1201 TSIGISLYPN DAEDVDSLIK FADTAMYHAK ALGRNNFQFY TNKLNEMATR HVQLEAGLKQ1260
 1261 AISRNELSLV YQPKFCLRKG SLTGLEALLR WHHSELGPIS PAEFIPLAEE TGIINQIGHW1320
 1321 VINHACQQLA EWNELGFGDI SMAVNLSARQ LKADIISTIE VALSVSGLPA KALELELTES1380
 1381 MIMGNPQESV NILSKLKALG LTIAVDDFGT GYSSLSYLKR FPIDTLKIDR EFVRDITNDP1440
 1441 DDAAITSAII ALAHSLELNV VAEGVETQEQ LNFLALQGCD QVQGFLLSKP LSAQDCLALL1500
 1501 QQRIK

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