YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|117921535, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGDTISELL KAILLPEKGE SMKLFNKMTT LALVTAGALA SVAAQAEEVV RVYNWSDYIA  60
   61 EDTLENFKKE TGIRVIYDVF DSNEVLEAKL LSGRSGYDIV VPSNHFLAKQ IKAGAFKPLD 120
  121 RSKLSNFKNL NADLMKQLEK ADPGNQYAVP YLWGTNGIGY NIDKVKAAVG EDAPFDSMEL 180
  181 IFNPKYAEKI SKCGFAMLDS ADDMVPQAMI YLGLDPNSTK AEDYEKAGEL LEKIRPYVTY 240
  241 FHSSRYISDL ANGDICVAFG FSGDVFQAAA RADEAGNGNK IGYSIPKEGA NLWFDMLAIP 300
  301 ADAANVENAH KLINYLLRPE VIAPISNYVA YANPNDPAQP LVDEAIRNDP AIYPPKEVLD 360
  361 KLYIGEIRPL KIQRVLTRVW TKVKSGQ

Type	Start	End	Confidence
Signal Peptide	1	46	0.80
N-region	1	37
H-region	38	43
C-region	44	46
Cleavage Site	46	47
Non-Cytoplasmic	47	387	0.99