YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78504220, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFFETTLD IGSFLYKSFL RQSLRCKPMA KAVSACILLS LFITTPVQAA KVLILGDSLG  60
   61 ASYGMSEQVG WVALLQKNLP EHEFTNGSVS GETTAGGLRR LPALLDSVAP DLVVVELGGN 120
  121 DGLRGFPPTQ LKNNLIQIIT LAKNSGAKVL LTEIMVPPNY GPRYTQKFTQ VYQEIAKDEE 180
  181 IALIPFFMQD IAPHPELMQR DGIHPNEKAQ EKIATWMQPW IEKALTQ

Type	Start	End	Confidence
Signal Peptide	1	49	0.99
N-region	1	40
H-region	41	46
C-region	47	49
Cleavage Site	49	50
Non-Cytoplasmic	50	227	0.99