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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78688544, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFGISSGH LYRTIRQVLA VICCHKQQIH LGKRIASLGY VVCLVSLFAV HFGLFPNMAM  60
   61 ANEVSQQQYR QALSQLTPAQ KLAHSHRVSM ILESDRPFWH QIAKFAKIAA MDLNIQLDVV 120
  121 YGDGTPETLL KLGHEAIDNK VSGIVFVPVS GMGQELLAEA NQQHIPVVTI NSEFKQSSLS 180
  181 LRTQNPNWIG RVAINNTNLG QSLLEKMFEH ENSAERMNVL LLAGNKDNLD VQKRTAELKS 240
  241 AVNKQFANAK LKVVNTDWTA SAARDAYLKA IKQDPSINTV IAMDTTMALA VSHEAEASTL 300
  301 RPIPHIASLS WDYQLAQGIQ NGTIAAGVGG VEFQGAFSLV LLFDYLNGVD IRSKGAEFLI 360
  361 APLIISPNNY NDYYELLDFD SLQPDFARVS LALNKNLFLV DFRLGALIPN MDLHRFMSIL 420
  421 TVEERAFINN NPIVRVGVDP HSAPIDFIDE NGIHRGMMAD YLAEISRVVP LIFQTYNEGS 480
  481 WQQAVEEFKH RKVDMLSLAS AGSGREQWML FTDPLNQYPP VIVTPIEGTH FNSLESLKGK 540
  541 SVSVVAGDIT QNHLLDDYPD IVLVPVSNLE QALTAVDKRQ VDAAFVNFPS TAHLLQSPPF 600
  601 NRLQITAATD YRFGISMGVR KDWPELQSIL NKAFAQIPQD KAREIQHRWV NVQYDLGLKK 660
  661 QQVFNWAVRI AVAVLLVLFL FSLRNRRLNK DIAQRIHTEQ QLSLSMHKFQ ALFDSAVDAC 720
  721 VITDSQGVII ECNSALLSLL KYQSKDQLIG QRTLVYYPEQ SDDALNQSVF ERRLQTVLDQ 780
  781 GQLKFESEFI TTAAEIIHVD VTLKRIELNG SLFVLGSYHD LSERKLMNAL LERERDLLKN 840
  841 VLGRSPIGVW ICVEGVCRYV NEQITEMTGL EVGQSVYRIF VQPEDYRCHI RELDLSQDST 900
  901 VFETQLFDAH GQRRDVLLTS YHTVQDGQNA NLCWALDITD TKSIQDELAI AKDAAEAANR 960
  961 AKSDFLANMS HEIRTPMNAI LGMSYLVLQT ELSSKQRDYV GKVHQAAGSL LGILNDILDF1020
 1021 SKIEAEKMDI ECTVFDLDDV LSNLANVVSY KVEEKNMAFI FDLPPELPRY YHGDGLRLGQ1080
 1081 ILINYCNNAV KFSHNDSSVV LSCQTQQQGE QVELTFCVED FGIGIPEQKQ GVLFGSFEQV1140
 1141 DASTSREYGG TGLGLAICKR LAHLMGGEVW CESELGVGSR FYLRLTLNCA DTYESQSLFD1200
 1201 ALAGETAKLV GLHPRLEKLL TEHGLAAKMQ VAVAETNSVI EELKHSRTRQ LVLCDYSAFS1260
 1261 PELLDALTAN PDSRMLLVGN LSDQDALRPL IENNPRVLSQ TKPLTPIAIG NALLSLLGHN1320
 1321 NENGRQVQQD HSLHALKTQL AGAEVLLVED NQLNQELAVE LLHQAGVNVT VANHGLEAIE1380
 1381 RIEQQYFDCV LMDCQMPVLD GYEATRRIRE LPEFANLPIL AMTANAMSGD IEKALAVGMN1440
 1441 DQITKPVHVK DLYTVMARRI TPKQRKSVPL VLKRASTAHS LPQLDGLQTH NGLALCDHNE1500
 1501 SLYSHLLGLF INTSKTLLGQ QQRAWQDENI DELRLSLHTL KGVAANVGAV EISRQAGELE1560
 1561 QQCHTAQQSF TVELHEQLLG LQTELQRLVT GLELWHQQLN SQHETTLDDD ALIGLMEQLE1620
 1621 NSLLEYNTNA LEWVNKLIHA PQFQSQASVL KQLKMDVELF DFEQALARLH TLKLAQEDVC1680
 1681 S

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