YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|113887109, gi...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQMNKKHKGF TLLEVMVVIV ILGILASMVV PNLMGNKDKA DQQKAVSDIV ALENALDMYK  60
   61 LDNGIYPTTE QGLEALVQKP TISPEPRNYR DEGYVKRLPQ DPWRNNYLLL SPGENSKLDI 120
  121 FSAGPDGQPG TEDDIGNWNL QNFQ

Type	Start	End	Confidence
Cytoplasmic	1	9	0.74
Transmembrane Helix	10	30	0.83
Non-Cytoplasmic	31	144	0.87