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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78689339, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGVTLSHPI LKFVLVVLCL ISLGAPRTGL ALPLNTANTQ LKFEHIRSEE GLNQNTITSL  60
   61 FMDSAGMLWI GTQDGLHSYN GYNFNLFIHS PNDPKSISES YVSDIIQDAQ GYIWVGTFSQ 120
  121 GINRLDLKTG TFERFGVEQG LTDPRVTKLN IVGNTLWIGT QGGLFSLSTR TNRVTQVSLG 180
  181 TSIEPQITSL ANVDNTYLLA GTKASGTFAV TANSITRLNV PQELVAYQIK ANSTRAITLA 240
  241 LGNQLWHYDL VSQQGQVLWQ TEKNVPYIKD FIQTPQGQFW VVGPDAGLIQ LQRAGEQFVA 300
  301 TYHRYDTKRS NSISENNILC LLEDPFGNLW IGASYSGLNK INTRRQYFQH LFEYSAKLPL 360
  361 QSNNIRTIYR SQDNALWIGT EGAGLKRLGF NSTQYEHYNS LFAKALGLEA HNLNLILRSI 420
  421 IQDQQGTLWF ASNYGLGRLS TGGDFSLLKV SDNQDTSTEA NYIRSLELDD QNRLWVATSH 480
  481 ALYRKAPEGN EFTPVSIAHI ENFYPMQNQL LTLRADKHDL WIGSLNGLVK LDMQTGKGEV 540
  541 FYHDPHDKNT IINNRIRDIL VASNGDIWFA THGGISRLSA QATTPIFSDY TREQGLPSDT 600
  601 IYALLEDAEH HIWFSSNAGI GKLNPVSGKV INFNEQEGLQ ALEFNGGVKL KDSDGDLWFG 660
  661 GINGINRFNP KTLPDKRSEA KVALTAYKIA GKKHTILDLS HPPKIVMNYT DQLVSFEVTS 720
  721 LDFSYTGKNR FSYFLEGFDN QWHDLPTGNE ITFTNIEPGN YVLHVRHSIE HNNEGNYALL 780
  781 VDLSIKAPLY RTQFAYVLYG LLTLALLVVV YRWRKQKRQQ QQEFDTSIRA SEERLKLALW 840
  841 ASGDGMWDWN IQEQQVYRTH TDIPVPQWNS HSLLHDNAHP EDRERFKQVL TEHLLGRSPF 900
  901 FEVEYRIEHS PGNWLWILER GKVVETNAQA QPVRMTGTTR NITSRKLIEN ELVLSSQVLN 960
  961 SMNEAVVVAG LDYRIRSVNP AFSAITGYSE RQISDKYLIH LAYSRQQRDL FNGIEQQLLR1020
 1021 HKHWAGEIWI RNKARKAILV WLEINQVIDV KGETSHFVAV FTDITERKKA EEDLRFLASF1080
 1081 DTLTGLPNRT LFQDRLNHAI SQAHRSNNIV ALLFLDLDRF KHINDSMGHH IGDLLLKAVA1140
 1141 HRLQNAVREG DTVARLGGDE FTIILEGVAK TKAATLISEK VLKAFQAPFL LDDKSLTIST1200
 1201 SIGISLYPND AEDVDSLIKF ADTAMYHAKA LGRNNFQFYT NKLNEMATRH VQLEAGLKQA1260
 1261 ISRNELSLVY QPKFCLRNGS LTGLEALLRW HHSELGPISP AEFIPLAEET GIINQIGHWV1320
 1321 INHACQQLAE WNELGLGNIS MAVNLSARQL KADIISTIEV ALAVSGLPAK VLELELTESM1380
 1381 IMANPQESVN ILSKLKALGL TIAVDDFGTG YSSLSYLKRF PIDTLKIDRE FVRDITNDPD1440
 1441 DAAITSAIIA LAHSLELNVV AEGVETQEQL NFLALQGCDQ VQGFLLSKPL SAQDCLALLQ1500
 1501 QRIK

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