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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78509920, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPLSLSMSA FGPFASSQTI DFTELGNNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE  60
   61 REGSQMRCDM ADDSVLTEVT FHFQLGSTGY RIRRVPEQER LKKSGDGSTV QKSEAQLYKI 120
  121 APDGSETLIV ASKVSDATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKAREQIFSQ 180
  181 LFQTHIYKRI EDTLKAKAAD IRNLVKEQRA RRDGILQTAA LTSDDELTAE LSRIEPEFAA 240
  241 ATAAKEQSVA AHLAALKQRD SAQQLFAEFT RLQELQAEAL SLNEQQAQIA TQTTRLEVAK 300
  301 QALRVKPLLD NALSREQEAS VAAAQRDSAQ LTLDAAKLAL SHAETAAQEI IPLEHKLREV 360
  361 EQQNSHLSAL VPQLAEFASL EQALAQAKEI LQHTKLQGQE SKTALATLVE QRGHCENQLP 420
  421 ALQSQSEQQL ATAQALQQHR HMLEQFKQWQ QICAKVAHTQ GVLEQVGLQG KALNTQYQAA 480
  481 STAYKSLQLK WFQGQAAILA RELKPHEPCP VCGSSAHPHP AVSHEDLPTD LQLQAAQDAE 540
  541 ALALDNLNKA RAEYRGLQKQ LETQQHQANE LATVLGDKVE LSLESHSQTL ERLMQQAKQA 600
  601 DAAAQALQQL QQQIKTLQQQ ESTLAQQLEL ERERYREQEG KVERLSGQFA EKALRIPEEY 660
  661 RTLDVLNQAI AHNQQQLEQI KRQIDVLRTA QQQATEQSVA AQTALSAAIE RCHATADLQA 720
  721 QAQQTLLTAL DNAGFIDRDA LREALLTDEQ MQTLAEGIET YHRQCALNQS QLSQLTTKLS 780
  781 ESTLPDLDAL EALLTERLAQ LKTAEEVWSQ LNTRLTLLNN TQTQLAIVDQ KAKSLEDEYA 840
  841 VVGTLADVAN GNTGNKISLQ RFVLSVLLDD VLLAATQRLH LMSKGRYRLL RKEDRAKGNK 900
  901 ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF 960
  961 GSLDQDSLEL AIRTLMDLQS AGRMIGVISH VSEMKEQIGT RIDILKTSHG SEIKVILP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle