YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|114225800, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYSANPQGH RTRRRPMSEI NVVPYIDVML VLLVIFMVTA PLLYQGVDVD LPQVDAQAEQ  60
   61 DPPQEPLIVS VDADGRYYLN MADDPEAPLD RGELSRAVMA ILTDSPDKRV LVNGDSNVPY 120
  121 GDVVSVMVRL RDAGAAGVGL MTRRPDGEG

Type	Start	End	Confidence
Cytoplasmic	1	20	0.96
Transmembrane Helix	21	43	0.93
Non-Cytoplasmic	44	149	0.98