YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|78702843, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSVESQSS GLDKAKIVVA IALVLGAIAG FHYYGDEPLL FRVLGLLAVV AAAGGVMMTT  60
   61 AAGQAVWQFA RASRQELRKV VWPNRQETLQ TTLIVFVMVV LVALFLWLVD LLAGWGIGRI 120
  121 IGLGV

Type	Start	End	Confidence
Cytoplasmic	1	14	0.93
Transmembrane Helix	15	35	0.91
Non-Cytoplasmic	36	43	0.86
Transmembrane Helix	44	67	0.92
Cytoplasmic	68	87	0.93
Transmembrane Helix	88	109	0.91
Non-Cytoplasmic	110	125	0.84