YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GL122_ORYSJ
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSNFFLLT ALIALVATQA MASDPSPLQD FCVADRNSPV HVNGFPCKDA KDVNVDDFFL  60
   61 AANLDKPMDT TKSKAGSNVT LINVMKLAGL NTLGISMARI DYAPKGQNPP HTHPRATEIL 120
  121 TVLEGTLYVG FVTSNQANGE NKLFTKTLNK GDVFVFPQGL IHFQFNPSYD KPAVAIAALS 180
  181 SQNPGAITIA NAVFGSNSPI SDDVLAKAFQ VDKKAVDWLQ AQFWENNHN

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	229	0.99