YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83318980, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPRAAPALR VLPLALAAAI FSGLTAILFY LSGVSSSHSG SRLSEADLAA LAALRGGFSK  60
   61 CVDANGLGLK AVTGEDYCRV VIQYPSDTVS KWRDPITHKA ESLSFEFNLC EAVASWEHVR 120
  121 NSTTVLTKEY IDALPNGWEE YAWRRINKGI LLNKCQNRSL CMEKLSLVLP ETSPYVPRHF 180
  181 GRCAVVGNSG DLLKTKFGDE IDSYDAVFRE NGAPTQNYTE YVGRKSTFRL LNRGSAKALD 240
  241 KVVELDETKK EALIVKTTIH DIMNQMIREL PITNPVYLML GTSFGSSAKG TGLKALEFAL 300
  301 SICDSVDMYG FTVDPGYKEW TRYFSEVRKG HTPLHGRAYY QMMECLGLVK IHSPMRGDPG 360
  361 RTVRWLPTKA TIEAARVASE KLLKRPGAGS DDPLGTCTMI KKRRKGKAPN RSGLRDAAMK 420
  421 HLEDMKGAAR YPLERNAGGG YLCMINDR

Type	Start	End	Confidence
Signal Peptide	1	36	0.70
N-region	1	27
H-region	28	33
C-region	34	36
Cleavage Site	36	37
Non-Cytoplasmic	37	448	0.99