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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|78708638, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVLATGLSL TPRFYSRSSI VVAASLLLSA APSSSSPRAR AAAPASGYSP WRGSISRISS  60
   61 HPTAMATTQA SEAATEKGLP LGMDVSMVDE YASQSKLLQE FVKIPTIGNA WIFNSKTENT 120
  121 SRAIVSVGQT DLLANKKRSF LLNSHISKNS SNSVDFQWSP FPIEMSGVSA VIPSPSGRKL 180
  181 LLIRNSEDDS PTKLEVWGPC QLENEIHIAQ SVHGSLYVDE WFEGISWNQE ETLVAYVAEE 240
  241 PPQPKPEFND SGYKKAGSSE KDCKSWKGKG DWEETWGETY SKKRIPALFV VNISSGEVRA 300
  301 VKGIPRTLSV GQVIWAPSSS HSLVFVAWSS DNGYQKTPRK LGIKYCFNRP CALYAVPDPF 360
  361 MEEADKPSLN VSKGETAPTT KLTSELSSAF FPRFSPDGKY LVFISAKSAI DSGTHNATNS 420
  421 MHKIDWPADG KLEGLSVADV VPIVMCPQDG CFPGLYCSGI LRNPWLTDGQ TMILSSIWGS 480
  481 KEVILSVNVV SREVSRVSPQ DSDYSWNVLA LDKDNILAVS SSLITVPQIY YGSEVCQTGK 540
  541 PNQWEWQEIA TPFPSPSDKI SAILADHKFS ILKIPISNSS NKLADGAKLP FEAIFVSWKD 600
  601 SATRPTIVVL HGGPHTVYPS SYSKSLAFLY SQGYNLLVVN YRGSLGFGEE ALQSLPGNIG 660
  661 SQDVNDVLTA LDFVIKKGLI DASKVAVVGG SHGGFLTTHL IGQAPGTFVA AAARNPVCNL 720
  721 SLMVGTTDIP EWCFVEIYGK EGKNCFSEYP SFDDLCQFHQ KSPISHISKV STPTLFLLGA 780
  781 QDLRVPVSNG LQYARTLKEM GVETKIIVFP EDMHGLDKPQ SDFESFLNIG VWFKKHMSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle