YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83776786
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKPAPFTAER SSVRGIPSLS RASSSFKVVA SGGKKIKTDK PYGINGGMNL RDGLDASGRK  60
   61 GKGKGVYQFV DKYGANVDGY SPIYDQKDWS PTGDVYTGGT TGLAIWAVTL VGLLAGGALL 120
  121 VYNTSALSQ

Type	Start	End	Confidence
Cytoplasmic	1	101	0.67
Transmembrane Helix	102	122	0.90
Non-Cytoplasmic	123	129	0.60