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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|162464392, gi...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQEGMGYNS KGGGGGGGGG GGLPMTAPRP RGASPLHHSR SRKIHRTFNN LKITVLCGLV  60
   61 TILVLRGTIG LNLSLPSQPS DAEALADAKA VEDIDRILRE IRSDSGPDPD DEGDFGAASG 120
  121 FNATALSATE AAAAYAAAVG KYALGPKISD WDAQRRRWLA QNPGFPATLA GGKPRIMLVT 180
  181 GSQPGPCDNP LGDHYLLKTT KNKIDYCRLH GIEIVHNLAH LDNELAGYWA KLPLLRRLML 240
  241 SHPEVEWIWW IDSDALFTDM SFELPLSRYD GHNLIIHGYQ DLLFEKHSWI ALNTGSFLFR 300
  301 NCQWSLDLLD AWAPMGPKGF IRDQAGKVLT ANLKGRPAFE ADDQSALIYL LLSQKDKWMD 360
  361 KVFIENSYYL HGFWAGLVDK YEEMMENHHP GLGDERWPFV THFVGCKPCG SYGDYPVERC 420
  421 LRSMERAFNF ADNQVLRLYG FSHKGLESPK IKRFRDQTTR PINDVENLDM KAKISTIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle