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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|33320664
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLHINGRPAA STCHMVGLLI VLAALVATGA TMGCPQSCTC QQRTVRCVKQ QLDKIPEMPL  60
   61 DTNMVDLRFN RIHEVPTDAF ANLAHLHTVF LSENQIVRIQ PGAFRQLPSL KHLYLNKNRI 120
  121 ATIEPGAFDA LDRLQNLMLY GNQIKRIPEG AFGALPSLKR FRLDDNPLEC DCSLLWFRKW 180
  181 IQGLGRSAQA TGECAVPETL ARRNVADLMD SDFHCTKPEI VTEPRDIEIS YGQTAVFSCK 240
  241 AGGDPRPEIV WMLNGNEIHS DDTRINVLPD GSLRIDEVTA IDAGHYECMA KNNMGEVHSR 300
  301 QAQMIVNNEV IETEAEAPKF IQTPPAEVDL LEGQPLVLHC VVSGAPTPSI LWKFNNQNIQ 360
  361 NGRIKLFGNG SLILPVASLD DGGVYSCYAG NAIGNVSVNA TVHVNEILPS TTTTTMPPAS 420
  421 SSSQQAVVVS SHHGDDAITP TPVAGQKSSP PTTSTVAGPG DRAPPHFTLA PERITTKTGT 480
  481 RVTLEREADG NPLPHIWWKR DGQPLSETNR IYLSDDDIEL TIEHVKESDA GSYTCVAENE 540
  541 LGSVEATAEL AVINDVGPPS FLFEPYDLEA IEGATIELPC KAEDDDIMQT KWRKDGRTIT 600
  601 QTDKFRLSLA GSLFISNLTE ADQGRYECSL LNQYGRATAS GLLTVKKKLE LLPGDQFVRI 660
  661 AIAEASREVD LAINQTIAKL FSVGGNRTQQ HHGDLFRIVR FPTGPARELA RAAEVYERAL 720
  721 VNIRKHVNTG RNLSTNTTDF NYNDLLSPDY LDLLAQLSGC MAHRVTPNCT DLCFHAKFRT 780
  781 LDGSCNNYKN PVWGSSLTGF RRLLPPIYEN GFNMPVGWNK TRLYHGFSKP SPRLVSTSLI 840
  841 STEVITPDDR ITHMVMQWGQ FLDHDLDHAI PSVSSESWDG VDCKKTCEYA APCYPIEIPE 900
  901 GDPRVHNRRC IDFVRSSAVC GSGMTSIFFG TVQPREQINQ LTAYIDGSQV YGYSESFARD 960
  961 LRNLTTDEGL LREGPHFPNQ KSLLPFAAPT DGMDCRRNLE ESTVNCFTSG DIRVNEQLGL1020
 1021 LSMHIVWFRE HNRIAQEFKR INPQWDGDKI YFESRKVVGA MMQHITYQQW LPEIIGEQGM1080
 1081 ALLGEYQGYD SSVNPSISNE FATAALRFGH SLINPILHRL NESFEPIEQG NIALHKAFFA1140
 1141 PWRIVYEGGV DPLLRGLFTV PAKLKKPNQN LNTDLTEKLF ETAHAVALDL AAINIQRSRD1200
 1201 HALPGYNDYR KFCNLKVAEN FDDLKQEISS EATRIKLQEL YGHPDNIDLW VGGILEDQLP1260
 1261 GAKVGPLFMC ILVEQFRKLR DGDRFWYEND QFKPDQLAQI KKRTLGRVLC DNGDNITRVT1320
 1321 ENVFVLPGKQ GGYKFCDDIP QMDFEHWIDC SECSRHHKRY HALPRQRRSI RAKRDIESKL1380
 1381 AKQPEPENHL EEDSFIDDDM NEERIEGLEA LIDTFQKSMK QMRRKIRRLE QQCSAAVAAG1440
 1441 NGSSNPAKGK PHGHCVDNKG IKRLNNEIWM RDDCTKCECE HHQISCETEK CAELICENGL1500
 1501 VLMKEDGKCC PTCSVDDSGI AVTAKDSP

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