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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63053546
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTNSYKKV IAGTMTAAMV AGVVSPVAAA GKSFPDVPAG HWGLDSINYL VDKGAIEGKP  60
   61 DGTYAPAEEI DRASAAKIMA ITLGLKVEEG AQPSFKDAKN HWASKYIAAV EKAGVVRGDG 120
  121 KENFSPDKKI DRASFASMIV GAYNLKDKVN GELVTKFEDL LDHWGEEKAN ILIHLGLSEG 180
  181 TGGNKWEPNK SVSRAEAAKF IAVADKKYGK KDNAQAYVTD VKVSEPTKLT LTGTGLDKLA 240
  241 AEDVTLEGDK AVAIEASADG TSAVVTLGGK VAPNKNLTVK VKNQSFVTKF VYEVKKLAVE 300
  301 KLTFDDDRAG QAVAFKLNDE KGNADVEYLN LADHDVKFVA NNLDGSSANI FEGGVATSTT 360
  361 GKLAVGIKPA DYKVEVQVTK RGGLTVSNTG IITVKNLDTP ASAIKNAVFA LDADNDGVVN 420
  421 YGSKLSGKDF ALNSQNLVVG EKASLNKLVA TIAGEDKVVD PGSISIKSSN HGIISVVNNY 480
  481 ITAEAAGEAT LTIKVGDATK DVKFKVTTDS RKLASVKANP DKLQVVQNKK LPVTFVTTDQ 540
  541 YGDPFGANPD AIKEVLPKTG VVAEGGLDVV TTDSGSIGTK TLDVTGNEVG EGTVHFQNGN 600
  601 GATLGSLYVN VTEGNVAFKN FELVSKVGQY GASPDTKLDL NVSDTVAYQL SKYTSDRVYS 660
  661 DPENLEGYAV ESKNEKVATA KIVGNKVVVT GKAPGKVDIH LTKNGATAGK ATIEIVQETI 720
  721 AIKSVNFKPV QTENFVEKKI NIGTVLELEK SNLDDIVKGI NLTKDTQHKV RVVKSGDEQG 780
  781 KLYLDRNGDA VFNAGDVNLG YVTVSQTSDS ALPNFKADLY DTLTTKYTDK GTLVFKVLGE 840
  841 KDVLTSEIGS QAVHVNVLNN PNL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle