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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|124487119, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAATAAAAP QQLSDEELFS QLRRYGLSPG PVTESTRPVY LKKLKKLREE EQQQQQQQQQ  60
   61 QQHRAGGRGN KTRNSNNNNT ATAMGGRPGS GDLAYLRSPA GLGRLSASAA ESPVAGGSGG 120
  121 AAAVPAAGSK VLLGFSSDES DVEASPREQA GGGGARRDRA ALQYRGLRAP PAPPAAGEVT 180
  181 GGHPGERRKP HSWWGARRPA GPEPQPPAAG SDGAAEDADE ELADGEDRDP EAEEPLWASR 240
  241 TVNGSRLLPY SSCREHYSDS EEEEEEGEED GDVAPARQVL KDDSLARHRP RRSHSKPFSA 300
  301 LTAKSGGSRQ ETSVQGGGAL AMNDRAAAAG SLDRSRNLEE AAAEPGGGGG GGCGCDPVDS 360
  361 IPRYRAGAKK LAPLLSPPSP DGDSTLESPT GPLLKTNNHI GGGAFGVDSP GLYANSLPPG 420
  421 ATAAAAPGTL RINHANHTGS NHTYLKTAYG KPKLCEPEEE LLQQFKREEV SPTGSFSAHY 480
  481 LSMFLLTAAC LFFLILGLTY LGMRGTGVPE DGGLSIKNPF DETFGKIQES EKNLLMSTLY 540
  541 KLHDRLAQIA GDHECGSSSQ RMLSVQEAAA YLKNLGPEYE DVFNTSLLWI FKNGKDVGIR 600
  601 CVGYGPEEDL TNITDVQFLQ STRPQMPFWC RFRRAFITVT HRLLLLCLGV VLVCVALRYM 660
  661 RYRWTKEEEE TRQMYDMVVK IIDVLRSHNE ACQETKDLQP YMPLPHVRDS LIQPQDRKKM 720
  721 KKVWDRAVDF LAANESRVRT ETRRVGGADF LVWRWIQPSA SCDKTLVIPS KVWQGQAFHL 780
  781 DRRNSPPNSL TPCLKIRNMF DPVMEIGDHW HLAIQEAILE KCSDNDGIVH IAVDRNSREG 840
  841 CVYVKCLSPE YAGKAFKALH GSWFDGKLVT VKYLRLDRYH HRFPQALTCN TPLKPANKHM 900
  901 NSLSHLRLRT GLANSQGSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle