YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COL11_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMRDLALAG MLISLAFLSL LPSGCPQQTT EDACSVQILV PGLKGDAGEK GDKGAPGRPG  60
   61 RVGPTGEKGD MGDKGQKGTV GRHGKIGPIG AKGEKGDSGD IGPPGPSGEP GIPCECSQLR 120
  121 KAIGEMDNQV TQLTTELKFI KNAVAGLRET ESKIYLLVKE EKRYADAQLS CQARGGTLSM 180
  181 PKDEAANGLM ASYLAQAGLA RVFIGINDLE KEGAFVYSDR SPMQTFNKWR SGEPNNAYDE 240
  241 EDCVEMVASG GWNDVACHIT MYFMCEFDKE NL

Type	Start	End	Confidence
Signal Peptide	1	26	0.99
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	272	0.99