YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|225630605, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLLLLKKAT NLIFPSVCVS CECIIDENLN LCSECNKKIN FLTKHYCNVC GVVISDNIYT  60
   61 CGKCIINPPP FKVLRSVFAY DQHSRNMIIN FKFFDNLNYV KIYAKWIHQA NQDTFQNAEI 120
  121 IIPIPLHKMR LFKRKYNQAA LLAKELTKLS NLSYTPFAIK RLRHTAPQAG LSLKQREKNL 180
  181 KKAFKTSNKK IIENKIVILV DDVVTTGATV RSCSQEILNS GAKEVRVLSL ARTVNDWTSC 240
  241 IKN

Type	Start	End	Confidence
Signal Peptide	1	23	0.62
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	243	0.99