YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75228698, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPTVITHAAV PLCIGLGLGS KVIPPRLLFA GIILAMLPDA DVLSFKFGVA YGNVFGHRGF  60
   61 THSLVFAFVV PLLCVLIGRR WFRAGLIRCW LFLTVSLLSH SLLDSVTTGG KGVGWLWPWS 120
  121 DERFFAPWQV IKVAPFALSR YTTPYGHQVI ISELMWVWLP GMVLMGMLWW RRR

Type	Start	End	Confidence
Cytoplasmic	1	21	0.72
Transmembrane Helix	22	43	0.70
Non-Cytoplasmic	44	58	0.78
Transmembrane Helix	59	78	0.93
Cytoplasmic	79	88	0.73
Transmembrane Helix	89	109	0.90
Non-Cytoplasmic	110	148	0.93
Transmembrane Helix	149	170	0.90
Cytoplasmic	171	173	0.87