YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|62130222, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPAASFLYC GCFTMIKKAT LLTAFSVTAF SAWAQDTSPD TLVVTANRFQ QPRSAVLAPV  60
   61 TIVTRQDIER WQSTSVNDVL RRLPGVDIAQ SGGAGQNSSI FIRGTNSSHV LVLIDGVRLN 120
  121 LAGVSGSADL SQFPVSLVQR IEYIRGPRSA IYGSDAIGGV VNIITTRDNP GTELTAGWGS 180
  181 NSYQNYDIST QQQLGENTRA TLIGDYEYTK GFDVVAKGGT GMQAQPDRDG FLSKTLYGAL 240
  241 EHTFSDRWSG FVRGYGYDNR TDYDAYYSPG SPLIDTRKLY SQSWDAGLRF NGERIQSQLV 300
  301 SSYSHSKDYN YDPHYGRYDT SATLDEMKQY NVQWTNSVVV GHGNVGAGVD WQKQTTTPGT 360
  361 GYVPEGYDQR NTGVYLTGLQ QLGDFTLEAA ARSDDNSQFG RHGTWQTSAG WEFIEGYRFI 420
  421 ASYGTSYKAP NLGQLYGYYG NPNLNPEKSK QWEGAFEGLT AGVSWRISGY RNDINDMIDY 480
  481 DDHLQKYYNE GKARIKGIEA TANFDTGPLT HTVSYDYVDA RNAITDTPLP RRSKQMAKYQ 540
  541 LDWDVYDFDW GVTYQYLGSR YDSDYSAYPY RTVKMGGVSL WDLTVAYPVT SHLTVRGKIA 600
  601 NLFDKDYETV YGYQTAGREY TLSGSYTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle