YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|83644649, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWKNTQQNYG LIAILLHWLV ALVVFGLFGL GLYMTDLSYY DAWYQKAPFI HKSIGMLLLF  60
   61 VIVFRLVWRF INVRPEPEPS LSRIEKVASE WAHRLLYLLL IATMIAGYLI STADGRGIDV 120
  121 FGWFEIPALL PPVKGMEDIA GEVHEWLAWT LVGLAVLHAL AAIKHHVIDK DKTLMRMFSP 180
  181 K

Type	Start	End	Confidence
Cytoplasmic	1	10	0.90
Transmembrane Helix	11	33	0.90
Non-Cytoplasmic	34	48	0.92
Transmembrane Helix	49	71	0.88
Cytoplasmic	72	92	0.93
Transmembrane Helix	93	113	0.93
Non-Cytoplasmic	114	145	0.96
Transmembrane Helix	146	168	0.92
Cytoplasmic	169	181	0.99