YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|85002289
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTESMIRDV ELAEEALSKT AGGSQGSGRC LCLSLFSFFL VAGGTTLFCL LHFGVIGPQR  60
   61 EEFPTGYSII SPLAQTLRSS SKTSSNKPVA HVVANLSTQG QLRWLNTYAN TLLANSVKLE 120
  121 DNQLVVPTDG LYLIYSQVLF RGQGCPSTHL FLTHTISRIA VSYPTKVNLL SAIKSPCQRE 180
  181 TPEGAEAKPW YEPIYQGGVF QLEKGDRLSA EINLPDYLDF AESGQVYFGI IAL

Type	Start	End	Confidence
Cytoplasmic	1	31	0.91
Transmembrane Helix	32	56	0.88
Non-Cytoplasmic	57	233	0.93