YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157819061, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPCSRRSK TPKTLAFLLV GMTFVVLNQW LLQEPMREKA NGSVVTPWSS EAAVLRLPLL  60
   61 PAPPCAANVS VDLLDGFQEL PARIQDFLRY RHCRRFPQLW DAPHKCVGPR GVFLLLAVKS 120
  121 SPAHYERREL IRRTWGQERS YSGQQVRRLF LVGTSSPEEA AREPQLADLL SLEAREHGDV 180
  181 LQWDFKDTFL NLTLKHLHLL DWTEEHCPGM SFLLSCDDDV FVHTANVLRF LEVQSPERHL 240
  241 FTGQLMAGSV PIRESWSKYF VPRQLFPGTA YPVYCSGGGF LMSRRTAQDL RRASHHVPLF 300
  301 PIDDAYMGMC LQQAGLAPSN HEGIRPFGVQ LPGTKRSSFD PCMYRELLLV HRFAPYEMLL 360
  361 MWKALHDPAL QCSHRQDAGS PEARGEMISD AH

Type	Start	End	Confidence
Signal Peptide	1	28	0.87
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	392	0.97